| Previous CloneSet | Next CloneSet | Back to Main Report |
| Clone Mass | Clones in CloneSet | Parameter Count | Clone Similarity | Syntax Category [Sequence Length] |
|---|---|---|---|---|
| 6 | 3 | 5 | 0.966 | or_test |
| Clone Abstraction | Parameter Bindings |
| Clone Instance (Click to see clone) | Line Count | Source Line | Source File |
|---|---|---|---|
| 1 | 6 | 223 | Bio/Align/Applications/_Clustalw.py |
| 2 | 6 | 323 | Bio/Align/Applications/_Clustalw.py |
| 3 | 6 | 329 | Bio/Align/Applications/_Clustalw.py |
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_Option(["-usetree","-USETREE","USETREE","usetree"],["input","file"],
lambda x:os.path.exists,False,"File name of guide tree",True)
|
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_Option(["-usetree1","-USETREE1","USETREE1","usetree1"],["input","file"],
lambda x:os.path.exists,False,"File name of guide tree for profile1",True)
|
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_Option(["-usetree2","-USETREE2","USETREE2","usetree2"],["input","file"],
lambda x:os.path.exists,False,"File name of guide tree for profile2",True)
|
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_Option([ [[#variable2efd1c00]], [[#variable2efd1b60]], [[#variable2efd1aa0]], [[#variable2efd1a20]]],["input","file"], lambda x:os.path.exists,False, [[#variable2efd19c0]],True) |
| CloneAbstraction |
| Parameter Index | Clone Instance | Parameter Name | Value |
|---|---|---|---|
| 1 | 1 | [[#2efd1c00]] | "-usetree2" |
| 1 | 2 | [[#2efd1c00]] | "-usetree1" |
| 1 | 3 | [[#2efd1c00]] | "-usetree" |
| 2 | 1 | [[#2efd1b60]] | "-USETREE2" |
| 2 | 2 | [[#2efd1b60]] | "-USETREE1" |
| 2 | 3 | [[#2efd1b60]] | "-USETREE" |
| 3 | 1 | [[#2efd1aa0]] | "USETREE2" |
| 3 | 2 | [[#2efd1aa0]] | "USETREE1" |
| 3 | 3 | [[#2efd1aa0]] | "USETREE" |
| 4 | 1 | [[#2efd1a20]] | "usetree2" |
| 4 | 2 | [[#2efd1a20]] | "usetree1" |
| 4 | 3 | [[#2efd1a20]] | "usetree" |
| 5 | 1 | [[#2efd19c0]] | "File name of guide tree for profile2" |
| 5 | 2 | [[#2efd19c0]] | "File name of guide tree for profile1" |
| 5 | 3 | [[#2efd19c0]] | "File name of guide tree" |