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| Clone Mass | Clones in CloneSet | Parameter Count | Clone Similarity | Syntax Category [Sequence Length] |
|---|---|---|---|---|
| 13 | 2 | 6 | 0.951 | compound_stmt |
| Clone Abstraction | Parameter Bindings |
| Clone Instance (Click to see clone) | Line Count | Source Line | Source File |
|---|---|---|---|
| 1 | 5 | 318 | Bio/SwissProt/SProt.py |
| 2 | 13 | 384 | Bio/SwissProt/SProt.py |
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def _scan_dt(self,uhandle,consumer):
self._scan_line("DT",uhandle,consumer.date,exactly_one = 1)
self._scan_line("DT",uhandle,consumer.date,exactly_one = 1)
# IPI doesn't necessarily contain the third line about annotations
self._scan_line("DT",uhandle,consumer.date,up_to_one = 1)
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def _scan_ra(self,uhandle,consumer):
# In UniProt release 1.12 of 6/21/04, there is a new RG
# (Reference Group) line, which references a group instead of
# an author. Each block must have at least 1 RA or RG line.
self._scan_line("RA",uhandle,consumer.reference_author,any_number = 1)
self._scan_line("RG",uhandle,consumer.reference_author,any_number = 1)
# PRKN_HUMAN has RG lines, then RA lines. The best solution
# is to write code that accepts either of the line types.
# This is the quick solution...
self._scan_line("RA",uhandle,consumer.reference_author,any_number = 1)
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def [[#variable61d01bc0]](self,uhandle,consumer): # In UniProt release 1.12 of 6/21/04, there is a new RG # (Reference Group) line, which references a group instead of # an author. Each block must have at least 1 RA or RG line. self._scan_line( [[#variable61d01b60]],uhandle,consumer. [[#variable61d006e0]], [[#variable61d01ac0]]= 1) self._scan_line( [[#variable61d01b00]],uhandle,consumer. [[#variable61d006e0]], [[#variable61d01ac0]]= 1) # PRKN_HUMAN has RG lines, then RA lines. The best solution # is to write code that accepts either of the line types. # This is the quick solution... # IPI doesn't necessarily contain the third line about annotations self._scan_line( [[#variable61d01b60]],uhandle,consumer. [[#variable61d006e0]], [[#variable61d006a0]]= 1) |
| CloneAbstraction |
| Parameter Index | Clone Instance | Parameter Name | Value |
|---|---|---|---|
| 1 | 1 | [[#61d01bc0]] | _scan_ra |
| 1 | 2 | [[#61d01bc0]] | _scan_dt |
| 2 | 1 | [[#61d01b60]] | "RA" |
| 2 | 2 | [[#61d01b60]] | "DT" |
| 3 | 1 | [[#61d006e0]] | reference_author |
| 3 | 2 | [[#61d006e0]] | date |
| 4 | 1 | [[#61d01ac0]] | any_number |
| 4 | 2 | [[#61d01ac0]] | exactly_one |
| 5 | 1 | [[#61d01b00]] | "RG" |
| 5 | 2 | [[#61d01b00]] | "DT" |
| 6 | 1 | [[#61d006a0]] | any_number |
| 6 | 2 | [[#61d006a0]] | up_to_one |