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| Clone Mass | Clones in CloneSet | Parameter Count | Clone Similarity | Syntax Category [Sequence Length] |
|---|---|---|---|---|
| 5 | 4 | 2 | 0.973 | compound_stmt |
| Clone Abstraction | Parameter Bindings |
| Clone Instance (Click to see clone) | Line Count | Source Line | Source File |
|---|---|---|---|
| 1 | 6 | 140 | Bio/SeqUtils/lcc.py |
| 2 | 5 | 146 | Bio/SeqUtils/lcc.py |
| 3 | 5 | 151 | Bio/SeqUtils/lcc.py |
| 4 | 5 | 156 | Bio/SeqUtils/lcc.py |
| ||||
if "A" not in seq:
term_a = 0
# Check to avoid calculating the log of 0.
else:
term_a = ((upper.count("A"))/float(wsize))*((math.log((upper.count("A"))/float(wsize)))/l2)
|
| ||||
if "C" not in seq:
term_c = 0
else:
term_c = ((upper.count("C"))/float(wsize))*((math.log((upper.count("C"))/float(wsize)))/l2)
|
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if "T" not in seq:
term_t = 0
else:
term_t = ((upper.count("T"))/float(wsize))*((math.log((upper.count("T"))/float(wsize)))/l2)
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if "G" not in seq:
term_g = 0
else:
term_g = ((upper.count("G"))/float(wsize))*((math.log((upper.count("G"))/float(wsize)))/l2)
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if [[#variable19aec380]]not in seq: [[#variable19aec320]]= 0 # Check to avoid calculating the log of 0. else: [[#variable19aec320]]= ((upper.count( [[#variable19aec380]]))/float(wsize))*((math.log((upper.count( [[#variable19aec380]]))/float(wsize)))/l2) |
| CloneAbstraction |
| Parameter Index | Clone Instance | Parameter Name | Value |
|---|---|---|---|
| 1 | 1 | [[#19aec380]] | "G" |
| 1 | 2 | [[#19aec380]] | "T" |
| 1 | 3 | [[#19aec380]] | "C" |
| 1 | 4 | [[#19aec380]] | "A" |
| 2 | 1 | [[#19aec320]] | term_g |
| 2 | 2 | [[#19aec320]] | term_t |
| 2 | 3 | [[#19aec320]] | term_c |
| 2 | 4 | [[#19aec320]] | term_a |