CloneSet237


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Clone
Mass
Clones in
CloneSet
Parameter
Count
Clone
Similarity
Syntax Category
[Sequence Length]
4260.971test_plus
Clone AbstractionParameter Bindings
Clone Instance
(Click to see clone)
Line CountSource Line
Source File
14297
Bio/Emboss/Applications.py
24347
Bio/Emboss/Applications.py
Clone Instance
1
Line Count
4
Source Line
297
Source File
Bio/Emboss/Applications.py

          _Option(["-msf","msf"],["input","file"],None,1,"Sequences file to be read in"),_Option(["-besttree","besttree"],["input"],None,0,"Search for the best tree")


Clone Instance
2
Line Count
4
Source Line
347
Source File
Bio/Emboss/Applications.py

          _Option(["-infile","infile"],["input","file"],None,1,"file to read in (New Hampshire standard form)"),_Option(["-notrout","notrout"],["input"],None,0,"Do not create a tree file")


Clone AbstractionParameter Count: 6Parameter Bindings

_Option([ [[#variable2eca84a0]], [[#variable2eca8440]]],["input","file"],None,1, [[#variable2eca83c0]]),_Option([ [[#variable2eca8340]], [[#variable2eca82c0]]],["input"],None,0, [[#variable2eca8240]])
 

CloneAbstraction
Parameter Bindings
Parameter
Index
Clone
Instance
Parameter
Name
Value
11[[#2eca84a0]]
"-msf" 
12[[#2eca84a0]]
"-infile" 
21[[#2eca8440]]
"msf" 
22[[#2eca8440]]
"infile" 
31[[#2eca83c0]]
"Sequences file to be read in" 
32[[#2eca83c0]]
"file to read in (New Hampshire standard form)" 
41[[#2eca8340]]
"-besttree" 
42[[#2eca8340]]
"-notrout" 
51[[#2eca82c0]]
"besttree" 
52[[#2eca82c0]]
"notrout" 
61[[#2eca8240]]
"Search for the best tree" 
62[[#2eca8240]]
"Do not create a tree file"