CloneSet239


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[Sequence Length]
5201.000stmt_list[3]
Clone AbstractionParameter Bindings
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Line CountSource Line
Source File
15325
Bio/pairwise2.py
25408
Bio/pairwise2.py
Clone Instance
1
Line Count
5
Source Line
325
Source File
Bio/pairwise2.py

    lenA,lenB =  len(sequenceA),len(sequenceB) 
    score_matrix,trace_matrix =  [ ],[ ] 
    for i in range(lenA): 
         score_matrix.append([None]*lenB) 
         trace_matrix.append([[None]]*lenB) 

     # The top and left borders of the matrices are special cases
     # because there are no previously aligned characters.  To simplify
     # the main loop, handle these separately.


Clone Instance
2
Line Count
5
Source Line
408
Source File
Bio/pairwise2.py

    # Create the score and traceback matrices.  These should be in the
    # shape:
    # sequenceA (down) x sequenceB (across)
    lenA,lenB =  len(sequenceA),len(sequenceB) 
    score_matrix,trace_matrix =  [ ],[ ] 
    for i in range(lenA): 
         score_matrix.append([None]*lenB) 
         trace_matrix.append([[None]]*lenB) 

     # The top and left borders of the matrices are special cases
     # because there are no previously aligned characters.  To simplify
     # the main loop, handle these separately.


Clone AbstractionParameter Count: 0Parameter Bindings

# Create the score and traceback matrices.  These should be in the
# shape:
# sequenceA (down) x sequenceB (across)
lenA,lenB = len(sequenceA),len(sequenceB) 
score_matrix,trace_matrix = [ ],[ ] 
for i in range(lenA):
  score_matrix.append([None]*lenB) 
  trace_matrix.append([[None]]*lenB) 
  # The top and left borders of the matrices are special cases
  # because there are no previously aligned characters.  To simplify
  # the main loop, handle these separately.
 

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None