CloneSet95


Clone Mass	Clones in CloneSet	Parameter Count	Clone Similarity	Syntax Category [Sequence Length]
14	2	4	0.958	compound_stmt

Clone Abstraction

Parameter Bindings

Clone Instance (Click to see clone)	Line Count	Source Line	Source File
1	14	144	Bio/Seq.py
2	14	160	Bio/Seq.py

Clone Instance
1

Line Count
14

Source Line
144

Source File

Bio/Seq.py

        if hasattr(other,"alphabet"):  
            #other should be a Seq or a MutableSeq
            if not Alphabet._check_type_compatible([self.alphabet,other.alphabet]):
                                                                      
                raise TypeError("Incompatable alphabets %s and %s"%(repr(self.alphabet),repr(other.alphabet))) 

            #They should be the same sequence type (or one of them is generic)
            a = Alphabet._consensus_alphabet([self.alphabet,other.alphabet]) 
            return self.__class__(str(self)+str(other),a) 
        elif isinstance(other,basestring):  
            #other is a plain string - use the current alphabet
            return self.__class__(str(self)+other,self.alphabet) 
        else: 
            raise TypeError

Clone Instance
2

Line Count
14

Source Line
160

Source File

Bio/Seq.py

        if hasattr(other,"alphabet"):  
            #other should be a Seq or a MutableSeq
            if not Alphabet._check_type_compatible([self.alphabet,other.alphabet]):
                                                                      
                raise TypeError("Incompatable alphabets %s and %s"%(repr(self.alphabet),repr(other.alphabet))) 

            #They should be the same sequence type (or one of them is generic)
            a = Alphabet._consensus_alphabet([self.alphabet,other.alphabet]) 
            return self.__class__(str(other)+str(self),a) 
        elif isinstance(other,basestring):  
            #other is a plain string - use the current alphabet
            return self.__class__(other+str(self),self.alphabet) 
        else: 
            raise TypeError

Clone Abstraction

Parameter Count: 4

Parameter Bindings

if hasattr(other,"alphabet"):
  #other should be a Seq or a MutableSeq
  if not Alphabet._check_type_compatible([self.alphabet,other.alphabet]):
  
    raise TypeError("Incompatable alphabets %s and %s"%(repr(self.alphabet),repr(other.alphabet))) 
    #They should be the same sequence type (or one of them is generic)
  a = Alphabet._consensus_alphabet([self.alphabet,other.alphabet]) 
  return self.__class__(str( [[#variable195f08a0]])+str( [[#variable195f0800]]),a) 
elif isinstance(other,basestring):
  #other is a plain string - use the current alphabet
  return self.__class__( [[#variable195f0780]]+ [[#variable195f0700]],self.alphabet) 
else:
  raise TypeError

CloneAbstraction

Parameter Bindings
Parameter Index	Clone Instance	Parameter Name	Value
1	1	`[[#195f08a0]]`	other
1	2	`[[#195f08a0]]`	self
2	1	`[[#195f0800]]`	self
2	2	`[[#195f0800]]`	other
3	1	`[[#195f0780]]`	other
3	2	`[[#195f0780]]`	str(self)
4	1	`[[#195f0700]]`	str(self)
4	2	`[[#195f0700]]`	other